workflow-documentation

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Linuxfabrik / checklistfabrik

Python tool that generates interactive HTML checklists from YAML templates. Jinja conditionals, reusable includes, pluggable modules, built-in web server. Ideal for SOPs, deployments & recurring ops.

python html yaml checklist devops automation deployment jinja2 sysadmin sop workflow-management runbook business-process business-process-management standard-operating-procedure checklist-as-code checklist-generator linuxfabrik workflow-documentation team-organization

Updated Sep 4, 2026
Python

A transparent ONT bacterial assembly case study for an *Acinetobacter* barcode07 isolate, built not only to generate an assembly, but to show how raw reads become an interpretable genome through QC evidence, assembler comparison, graph checks, phylogeny, annotation, documented decisions, and honest limitations.

python reproducible-research bioinformatics-pipeline phylogenetics kegg-pathway genome-assembly kat bandage 16s-rrna nanopore-sequencing busco long-read-sequencing quast flye iqtree acinetobacter workflow-documentation bacterial-genomics ont-sequencing

Updated Mar 26, 2026
HTML

Workflows

seanpm2001 / Workflows

Sponsor

Star 2

i️🚧️🌊️ Information about Git workflows usage in seanpm2001 projects. See also: seanpm2001:GitHub-actions

markdown documentation docs article gplv3 actions workflows md txt gpl3 github-actions seanpm2001 seanpm2001-docs seanpm2001-documentation seanpm2001-workflows workflow-documentation actions-documentation github-actions-documentation workflow-docs actions-docs

Updated Jul 13, 2023
Markdown

GitHub-Actions

seanpm2001 / GitHub-Actions

Sponsor

Star 2

i️🚧️🌊️:octocat: Information about GitHub actions usage in seanpm2001 projects. See also: seanpm2001:Workflows

github markdown documentation docs gplv3 workflows md txt gpl3 github-actions github-workflows seanpm2001 seanpm2001-github seanpm2001-docs seanpm2001-documentation workflow-documentation github-actions-documentation workflow-docs seanpm2001-github-actions github-actions-docs

Updated Jul 13, 2023
Markdown

nh0397 / WorkFlowDoc

Star 1

Automated process documentation: Playwright + Gemini agent records workflows in the browser and generates step-by-step docs with screenshots. POC for onboarding and knowledge bases.

python automation documentation-tool gemini playwright workflow-documentation agentic-ai

Updated Dec 4, 2025
Python

KingLouis237 / O67940-EvidenceChain-BioInfo

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A reproducible modern re-analysis of the O67940_AQUAE protein-function case study, rebuilding the evidence chain behind annotation transfer with current databases, AlphaFold, structural comparison, residue mapping, provenance tracking, and explicit limits on what the computational workflow can and cannot prove.