Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.
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Sep 8, 2026 - Jupyter Notebook
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neuropixels
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A curated list of awesome Neuropixels resources.
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Dec 16, 2025
Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portrait features. Includes specific example on dynamical systems, synthetic- and real neural datasets.
dynamical-systems dynamical-modeling neural-data-analysis geometric-deep-learning vector-fields single-neuron neuropixels
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Jul 31, 2025 - Python
CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
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Dec 5, 2025 - MATLAB
A package to manage electrophysiology analysis.
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Sep 7, 2026 - Python
A web-based, neural probe channel map editor for the Neuropixels probe.
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Aug 8, 2026 - Python
Bonsai library for the Open Ephys Onix Acquisition System
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Sep 7, 2026 - C#
Python-based toolkit to import and analyse Neuropixel probes data that was previously processed using Kilosort 3.0.
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Apr 3, 2024 - Python
Automatic detection of probe position from multiple camera views
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Aug 26, 2026 - Python
Matlab user interface for the analysis of LFP and spike data from extracellular recordings supporting a variety of existing Python and Matlab tools.
python matlab neuroscience toolbox user-interface electrophysiology preprocessing spike-sorting event-related-potentials lfp-analysis spike-analysis open-ephys time-frequency-analysis phase-estimation kilosort power-spectrum-estimation spikeinterface neuropixels high-density-mea current-source-density
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May 31, 2026 - MATLAB
Real-data IBL Neuropixels analysis of decision-related neural population geometry, decoding, and cross-temporal dynamics.
python machine-learning computational-neuroscience open-science nwb ibl neural-decoding neuropixels dandi neural-manifolds
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Jul 27, 2026 - Python
Joint spike localization + motion drift correction for Neuropixels via self-supervised SLN + DREDge alternating optimization.
neural-network pytorch transformer electrophysiology spike-sorting motion-estimation self-supervised-learning drift-correction neuropixels spike-localization
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Jul 7, 2026 - Python
Curate single-units sorted with more than 80% accuracy (trained and tested against a large-scale biophysical ground truth model of the cortex) from other units, based on spike train and waveform-based quality metrics.
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Aug 28, 2026 - Python
Falsification lab for a G2/SU(3) ≅ S6 conjecture about cortical dynamics. H1-spontaneous refuted 12/12 on Allen Neuropixels.
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Aug 27, 2026 - Python
Lightweight automated pipeline for preprocessing, spike sorting, and synchronizing Neuropixels data.
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Sep 2, 2026 - Python
ZPE-Neuro V0.0: DETERMINISTIC NEURAL SIGNAL CODEC: Extracellular Spikes | Neuropixels | DANDI-Anchored | IBL Validated | Spike Train Transport
python machine-learning compression time-series signal-processing neuroscience artificial-intelligence computational-neuroscience computational-physics codec electrophysiology spike-sorting brain-computer-interface neural-data-analysis lossless-compression neural-decoding neural-engineering spike-train neuropixels dandi
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Jun 19, 2026 - Python
Visual tool for elecrophysiologists to inspect and filter units based on their response to stimulus
visualization python data-analysis bokeh electrophysiology ephys neuropixels firing-rates firing-rate
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Aug 20, 2026 - Python
A fast, memory-bounded Rust engine for electrophysiology signal processing — Neuropixels-scale, callable from Python.
python rust open-source time-series signal-processing dsp neuroscience scientific-computing electrophysiology nwb spike-sorting pyo3 zarr spikeinterface neuropixels
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Jul 8, 2026 - HTML
Matlab functions to convert ecephys recordings and associated behavioural data to Neurodata Without Borders (NWB) file format
open-science nwb neurodata-without-borders fair-principles spiking neuropixels matnwb extracellular-electrophysiology ecephys neuronexus extracellular-electrode silicon-probe
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May 7, 2023 - MATLAB
NSI — complete, std-only, real-time vendor-agnostic neural I/O system in Rust. Runs end-to-end on real Neuropixels data.
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Jun 26, 2026 - Rust
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