Benchmarking for long-reads assembler
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Apr 5, 2021
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fusarium
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R pipeline for identifying systems-level network rewiring and functional defense modules in Fusarium species using differential interactome analysis.
bioinformatics systems-biology community-detection computational-biology louvain network-analysis transcriptomics protein-protein-interaction rewired fusarium biocontrol differential-network
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Jun 9, 2026 - R
R workflows used to analyze microbial community sequence data
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Apr 21, 2021 - R
This repository contains the scripts and workflows used for the analysis of Fusarium oxysporum f. sp. lactucae (Fola) isolates.
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May 12, 2026 - Python
Static, client-side Fusarium gene analysis tool: ortholog mapping, PPI networks, phylogenetic trees, and GO/KEGG enrichment across 20 species — no backend required.
javascript bioinformatics mapping phylogenetics client-side comparative-genomics kegg ppi orthology bioinformatics-tool cross-species functional-enrichment fusarium go-enrichment string-database
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Feb 18, 2026 - JavaScript
Effector dataset and analysis scripts for Fusarium effectoromics, including NCBI accession download workflows.
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Aug 5, 2026 - Python
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