Bioinformatics library in Kotlin
kotlin hmm bioinformatics progress methylation dataset fasta chip-seq sampling bed bam dataframe fastq mixture hypothesis-testing 2bit cancellable dna-sequence
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Jul 24, 2026 - Kotlin
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dna-sequence
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Variational Auto Encoders for learning binding signatures of transcription factors
machine-learning deep-learning tensorflow dna vae atac-seq motif-discovery transcription-factor variational-auto-encoder dna-sequence
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Mar 14, 2024 - Python
In this project we implement a DNA-Genetic Encryption Technique (D-GET) in order to make the DNA SEQUENCE more secure and less predictable.
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Dec 6, 2020 - Python
A lightweight Python module to read and write FASTA sequence records
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Nov 17, 2024 - Python
A DNA design and assembly method based on multi-objective optimization.
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May 3, 2024 - Python
Algorithm Semester-long Project
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May 6, 2021 - Jupyter Notebook
Scripts to analyse the sequence composition and bias of protein and nucleotide sequences.
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May 12, 2021 - R
Analyze a DNA sequence for primer construction
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Aug 21, 2019 - Python
Recode a DNA sequence to match a target amino‐acid sequence with the minimal number of nucleotide changes, preserving the reading frame. Includes a CLI and Python API.
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Sep 15, 2025 - Python
Moduating gene expression via in-silico mutagenesis
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Aug 11, 2025 - Python
Offline bilingual DNA sequence inspector for Windows
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Jul 15, 2026 - HTML
🧬 Zero-dependency Python CLI to translate RNA and DNA sequences into amino acid chains using the standard genetic code, with FASTA-ready output formats.
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Aug 23, 2026 - Python
DNAc is a programming language for DNAs.
genetics genetic-algorithm dna genetic-programming genetic-analysis dna-methylation genetic-variants dna-assembly genetic-programming-algorithm dna-sequence dna-processing
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Aug 17, 2020
⚗️ Zero-dependency Python CLI to generate DNA complements and reverse complements using standard base-pairing rules.
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Jul 8, 2026 - Python
Bioinformatics ML project comparing DNA sequence encoding methods for classification.
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Jul 5, 2026 - Python
A comprehensive implementation of DNA sequence alignment algorithms using dynamic programming.
python bioinformatics algorithms computational-biology needleman-wunsch python3 pytest backtracking dynamic-programming academic-project mypy genome-analysis type-hints sequence-alignment performance-benchmarking algorithm-design vizualization space-optimization dna-sequence hirschberg-algorithm
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Nov 5, 2025 - Python
Beginner Python FASTA toolkit for DNA validation, GC content, reverse complements, and motif analysis.
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Aug 1, 2026 - Python
Fine-tuning DNABERT-2 to classify normal vs tumour colorectal gene enhancers from DNA sequence alone (MSc thesis). PR-AUC 0.758 · arXiv:2509.25274
machine-learning bioinformatics deep-learning genomics scikit-learn transformers computational-biology pytorch enhancers optuna dna-sequence hugging-face colorectal-cancer genomic-language-model dnabert2
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Jul 24, 2026 - Jupyter Notebook
A repository containing all the file projects that I have for the Bioinformatics 3 (COMP 4312b) course.
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Jan 11, 2023
Beginner Python tool for finding common restriction enzyme recognition sites in the pBR322 plasmid sequence.
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Aug 1, 2026 - Python
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