A Quarto-based collection of supplementary material from the clinical prediction models book.
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Mar 24, 2026 - R
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clinical-prediction-models
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Interpretable and continuous AKI prediction in the intensive care
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Oct 4, 2021 - Jupyter Notebook
Repo for the paper entitled "Clinical Prediction Models to Predict the Risk of Multiple Binary Outcomes: a comparison of multivariate approaches".
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Nov 3, 2020 - R
An open science project -- recursive harmonic resonance data: frequency signatures & universal ratios from subquantum to stellar. Welcome to the Aramis Field. (Errors are probably the AI's fault.)
open-science particle-physics biophysics frequency-analysis biomarker-discovery mathematical-biology precision-medicine cymatics alternative-medicine bioelectromagnetics clinical-prediction-models healing-spells quantum-biology medical-research neuroregeneration biofield harmonic-resonance-systems
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Apr 8, 2026 - Jupyter Notebook
This project builds and validates a Markov model to predict the clinical trajectory of hospitalized COVID-19 patients at UCSF
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Apr 27, 2022 - R
Repo for the paper entitled "Developing Risk Prediction Models using Penalisation within Data that Adheres to Minimum Sample Size Criteria"
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Sep 20, 2021 - R
Big Data for Quality of Life (BD4QoL) EU project repository.
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Jul 15, 2024 - Python
End-to-end binary classification pipeline for clinical risk prediction using PyTorch. Includes preprocessing, imbalanced data handling with SMOTE, optimizer benchmarking (SGD vs Adam), and performance visualization (AUC-ROC, Confusion Matrix). Designed to align with healthcare AI applications and model evaluation best practices.
machine-learning torch pytorch diabetes binary-classification imbalanced-data model-evaluation smote sigmoid healthcare-ai clinical-prediction-models optimizer-comparison
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Jun 19, 2025 - Jupyter Notebook
Transparent network/feature-space toolkit for graph-shaped data: honest evaluation (calibration, permutation nulls, model cards), closed-form contestability, and federated governed aggregates. Research demonstrator — not clinical decision support.
python data-science machine-learning calibration epidemiology reproducibility network-analysis clinical-prediction-models federated-analysis
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Jun 15, 2026 - Python
This repo contains the code used for the CARSS external validation project.
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Apr 12, 2024 - R
Predicting 10-year coronary heart disease (CHD) risk using 8 machine learning models on imbalanced clinical data. Best model: AdaBoost (balanced accuracy ~0.697). Includes data cleaning, feature engineering, class imbalance handling, and model comparison.
python random-forest healthcare xgboost machinelearning adaboost clinical-prediction-models sickit-learn imbalaced-datasets
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Mar 19, 2026 - Jupyter Notebook
A literature review exploring how missing data was handled across the pipeline of commonly used UK clinical prediction models
missing-data real-world-evidence literature-review missing-data-imputation clinical-prediction-models
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Aug 10, 2023 - R
This is a collection of several papers that I wrote for my Cases in Business Analytics Course which discusses my findings using JMP Pro 17 as they relate to different industries.
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Jan 5, 2024
This project evaluates the relationship between Area Deprivation Index (ADI), clinical severity, length of stay (LOS), and readmission among COVID-19 patients at UCSF
adi clinical-data area-deprivation-index covid-19 covid covid19 length-of-stay clinical-prediction-models
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Apr 21, 2022 - R
Detection of Parkinson's Disease Early Progressors Using Routine Clinical Predictors
python machine-learning jupyter-notebook artificial-intelligence parkinsons-disease clinical-prediction-models early-progression
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Feb 15, 2022 - Jupyter Notebook
Asymmetry at Disease Onset Is Not a Predictor of Parkinson’s Disease Progression
python machine-learning jupyter-notebook artificial-intelligence parkinsons-disease clinical-prediction-models
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Feb 15, 2022 - Jupyter Notebook
Calibrated plasma proteomic ML classification of ATI — KPMP SomaScan, RO-2026-001 | Frontier Translational Research Lab, BU
bioinformatics open-science xgboost machine-learning-models proteomics-data-analysis clinical-prediction-models kidney-disease-prediction
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May 19, 2026 - Python
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