ant-behavior

Cognitive ecosystem framework pairing Active Inference agent models with an Obsidian-compatible markdown knowledge graph — generates executable Python from markdown specs, runs multi-agent simulations, and auto-validates probabilistic constraints.

python markdown research simulation computational-biology neuroscience multi-agent knowledge-graph code-generation cognitive-science obsidian cognitive-modeling active-inference bayesian-modeling ant-behavior

• Updated Sep 6, 2026
• Python

METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL, joint PCA, 70+ plot types — uv-managed, 7,700+ tests, demoed on 8,300+ samples across 28 species.

python bioinformatics gwas rna-seq genomics computational-biology data-visualization proteomics ecology transcriptomics single-cell multi-agent-systems eqtl ants epigenomics multi-omics entomology active-inference hymenoptera ant-behavior

• Updated Sep 8, 2026
• Python