A Python implementation of the ConText algorithm for clinical text concept assertion using the spaCy framework.
Development for cycontext has been moved to medSpaCy and should now be installed as:
pip install medspacy
# Option 1: Load with a medspacy pipeline import medspacy nlp = medspacy.load() print(nlp.pipe_names) # Option 2: Manually add to a spaCy model import spacy from medspacy.context import ConTextComponent nlp = spacy.load("en_core_web_sm") nlp.add_pipe(ConTextComponent(nlp))
Please see the medSpaCy GitHub page for additional information and documentation.