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<code>smiles_loader.cpp</code> has 3,057 lines of code, which is greater than 2,000 authorized. Split it into smaller files

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

#3418 In epam/Indigo;

· AlexeyGirin opened on Dec 24, 2025

<code>sequence_loader.cpp</code> has 2,239 lines of code, which is greater than 2,000 authorized. Split it into smaller files

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

#3417 In epam/Indigo;

· AlexeyGirin opened on Dec 24, 2025

<code>query_molecule.cpp</code> has 2,740 lines of code, which is greater than 2,000 authorized. Split it into smaller files

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

#3416 In epam/Indigo;

· AlexeyGirin opened on Dec 24, 2025

<code>molecule_json_saver.cpp</code> has 2,432 lines of code, which is greater than 2,000 authorized. Split it into smaller files

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

#3414 In epam/Indigo;

· AlexeyGirin opened on Dec 24, 2025

Refactor: Public APIs should be documented

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

Bug

#3387 In epam/Indigo;

· AlexeyGirin opened on Dec 20, 2025

Refactor: Lines of code should not be too long

Priority: Low

Severity: LowLow level visibility to the user Low level visibility to the user

SonarBucket: Issues found by Sonar scanner Bucket: Issues found by Sonar scanner

Status: Open.

Bug

#3383 In epam/Indigo;

· AlexeyGirin opened on Dec 20, 2025

Improve the alignment logic

AntisenseBucket: Antisense related issues Bucket: Antisense related issues

Status: Open.

Feature

#3375 In epam/Indigo;

· ljubica-milovic opened on Dec 9, 2025

·

Indigo-1.40.0-rc.1 (current)

Issue in CDX → SMILES Conversion Using Indigo.NET (v1.30.1)

Status: Open.

#3364 In epam/Indigo;

· allasairadha opened on Dec 1, 2025

Atoms with invalid valence loaded with explicitly defined valence from CDX

Import from CDX

Priority: Medium

regress found by autotest

regression

Severity: MediumMedium level visibility to the user Medium level visibility to the user

Status: Open.

Bug

#3359 In epam/Indigo;

· AlexeyGirin opened on Nov 27, 2025

·

Indigo-1.40.0-rc.1 (current)

System ignores <code>Implicit H count</code> value in export to SVG/PNG

Export to SVG/PNGBucket: Bugs related to SVG/PNG export Bucket: Bugs related to SVG/PNG export

Priority: Medium

Severity: MediumMedium level visibility to the user Medium level visibility to the user

User`s Feedback

Status: Open.

Bug

#3353 In epam/Indigo;

· ratamahata opened on Nov 24, 2025

·

Indigo-1.40.0-rc.1 (current)

Use BIOVIA post 2014 valence table to calculate atomic valences from molfiles

Export to MOLBucket: Export to MOL related issues Bucket: Export to MOL related issues

Import from MOL

User`s Feedback

Status: Open.

Feature

#3333 In epam/Indigo;

· jblack-mestre opened on Nov 13, 2025

Unnecessary Indigo technical details are displayed in error message for invalid AxoLabs sequence

AxoLabs

Priority: Medium

Severity: MediumMedium level visibility to the user Medium level visibility to the user

Status: Open.

Bug

#3332 In epam/Indigo;

· Zhirnoff opened on Nov 12, 2025

·

Indigo-1.40.0-rc.1 (current)