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1. CRISPRviewR CRISPRviewR Public

   an R package for repairing, comparing, and visualizing CRISPRs across environmental datasets

   R 1

2. bracken_plot bracken_plot Public

   A Shiny app for taxonomic abundance visualization

   R 9 1

3. nodeSeqs nodeSeqs Public

   Shell script for extracting sequences from high-degree nodes in assembly graphs

   Shell

4. findMotifs findMotifs Public

   R script for finding and scoring motifs in small genomes using position-frequency tables

   R 1

5. cluster_W3_manuscript cluster_W3_manuscript Public

   code for Bacillus phage cluster W3 manuscript

   Shell

6. PhagePipeline PhagePipeline Public

   Turner Lab phage assembly and annotation pipeline

   Shell