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Syndemics Lab at Boston Medical Center

Syndemics Lab at Boston Medical Center

Welcome to the Syndemics Lab. Under Lead Principal Investigator Benjamin P. Linas, we conduct research as part of Boston Medical Center.

Syndemics Lab Logo BMC Logo

What We Do

Our team studies synergistic epidemics—syndemics—with a particular focus on Hepatitis C Virus (HCV), the Human Immunodeficiency Virus (HIV), and substance use disorders. Our work is centered on using simulation and cost-effectiveness analysis methods to evaluate current public health guidelines and policies, primarily through use of our simulation models, RESPOND and HEP-CE.

RESPOND

RESPOND Logo

Researching Effective Strategies to Prevent Opioid Death (RESPOND) is a population-level, cohort-based simulation model that simulates populations with opioid use disorder through movements between health states which represent varied substance use behaviors and different medical treatments or interventions.

HEP-CE

HEP-CE Logo

Hepatitis C Cost Effectiveness (HEP-CE) is a Markov chain Monte Carlo micro-simulation model focused on studying the syndemic of opioid use disorder and the hepatitis C virus (HCV). HEP-CE models HCV incidence, screening, linkage to care, treatment, and related morbidity risks, measuring costs and quality-adjusted life years so that relative benefits of treatment policies may be compared.

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  1. respond respond Public

    Rewrite for the Original RESPOND Model. The new model is intended to be vectorized while still maintaining all the old flexibility of the original RESPOND.

    C++ 2

  2. hep-ce hep-ce Public

    A microsimulation model which simulates Hepatitis C virus (HCV) incidence, detection, and treatment, often in populations with high risk of opioid use disorder (OUD)

    C++ 3

  3. Syndemics Syndemics Public

    R package for commonly used SyndemicsLab functions

    R

  4. PHD PHD Public

    MA Dept. of Public Health scripts to establish a cohort of people who use opioids and extract a time series for their MOUD, Incarcerations, and Overdoses stratified by age group, sex, and race

    SAS 3 5

  5. DataManagement DataManagement Public

    DataManagement is a library for handling simulation inputs for the Syndemics Lab's simulation models, HEP-CE and RESPOND.

    C++

Repositories

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Showing 10 of 17 repositories
  • merc-ui Public

    A web application used to interface with the RESPOND simulation model.

    SyndemicsLab/merc-ui's past year of commit activity
    TypeScript 0 0 10 3 Updated Sep 8, 2026
  • crc-sim Public

    Internal tooling for Estimation of Opioid Use Disorder Prevalence Under Unique Data Scenarios: A Simulation Study, colloquially 'CRCSim'

    SyndemicsLab/crc-sim's past year of commit activity
    R 0 MIT 0 1 1 Updated Sep 8, 2026
  • hep-ce Public

    A microsimulation model which simulates Hepatitis C virus (HCV) incidence, detection, and treatment, often in populations with high risk of opioid use disorder (OUD)

    SyndemicsLab/hep-ce's past year of commit activity
    C++ 3 AGPL-3.0 0 0 0 Updated Sep 3, 2026
  • respond Public

    Rewrite for the Original RESPOND Model. The new model is intended to be vectorized while still maintaining all the old flexibility of the original RESPOND.

    SyndemicsLab/respond's past year of commit activity
    C++ 2 AGPL-3.0 0 0 0 Updated Aug 24, 2026
  • respondpy Public

    Python language bindings for the RESPOND simulation model

    SyndemicsLab/respondpy's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Aug 21, 2026
  • respond-benchmarking Public

    A helper repository used to benchmark RESPONDv1 vs RESPONDv2. The core metric is user throughput.

    SyndemicsLab/respond-benchmarking's past year of commit activity
    R 0 0 0 0 Updated Aug 21, 2026
  • phd-prevent Public Forked from SyndemicsLab/PHD

    MA Dept. of Public Health scripts to establish a cohort of people who use opioids and extract a time series for their MOUD, Incarcerations, and Overdoses stratified by age group, sex, and race

    SyndemicsLab/phd-prevent's past year of commit activity
    SAS 0 MIT 5 0 1 Updated Aug 10, 2026
  • analysis-template-R Public template

    A template repository for R analysis projects

    SyndemicsLab/analysis-template-R's past year of commit activity
    R 0 AGPL-3.0 0 0 0 Updated Jul 2, 2026
  • Addressing-Encampments Public

    Titled "Mortality and Economic Impact of a Police Sweep on People Who are Unsheltered and Who Use Opioids" and colloquially called "Sweeps", this project uses the RESPOND model to model the mortality and health-economic impacts of a street sweep on a cohort of individuals who are unhoused and use opioids.

    SyndemicsLab/Addressing-Encampments's past year of commit activity
    R 0 AGPL-3.0 0 0 0 Updated Jun 11, 2026
  • PHD Public

    MA Dept. of Public Health scripts to establish a cohort of people who use opioids and extract a time series for their MOUD, Incarcerations, and Overdoses stratified by age group, sex, and race

    SyndemicsLab/PHD's past year of commit activity
    SAS 3 MIT 5 0 0 Updated Apr 3, 2026

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