Build and Push Docker Images for Labs

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Welcome to the Omics Integration and Systems Biology Workshop GitHub repository! This repository contains resources, materials, and updates related to the 2024 workshop.

This workshop focuses on the integration of omics data and systems biology approaches. Keep an eye on this repository as it will receive frequent updates. Make sure to also visit our course homepage on Canvas for additional materials and information.

• Practical Information
• Workshop Schedule
• Reading Materials
• Pre-course Preparation
• Invited Speakers

• Course homepage: GitHub Pages

• Course homepage: Canvas Course Page

For information about this course please contact through the email rasool.saghaleyni@nbis.se or edu.omics-integration.nbis.se.

1. First either create an issue or pick one of the currently available issues.
2. Create a branch based on the issue from OMICSINT_H24 brnach.
3. Make your changes on the lab, Dockerfile, [lab_name]_env.yml, [lab_name].ipynb or [lab_name].rmd
4. Make sure that the docker works properly by testing it on your local machine.
5. Make a PR to OMICSINT_H24 brnach and assign it to one of the reviewers.

• Online 8 February - 10 February 2023
• Online 18 March - 22 April 2022, CZI Uppdragsutbilding (github repo)
• Online 6 - 10 September 2021, ELIXIR Omics Integration
• Online 22 - 23 July 2021, as part of the ICMB / ECCB
• Online 19 - 23 April 2021
• Lund 5 - 9 October 2020
• Stockholm 9 - 12 Sep 2019