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IFNAR1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
IFNAR1
Available structures
PDB Ortholog search: PDBe RCSB
List of PDB id codes

3S98, 3SE3, 3SE4, 4PO6

Identifiers
Aliases IFNAR1 , AVP, IFN-alpha-REC, IFNAR, IFNBR, IFRC, interferon alpha and beta receptor subunit 1
External IDsOMIM: 107450; MGI: 107658; HomoloGene: 524; GeneCards: IFNAR1; OMA:IFNAR1 - orthologs
Gene location (Human)
Chromosome 21 (human)
Chr. Chromosome 21 (human) [1]
Band 21q22.11Start33,324,429 bp [1]
End33,359,864 bp [1]
Gene location (Mouse)
Chromosome 16 (mouse)
Chr. Chromosome 16 (mouse)[2]
Band 16 C3.3|16 52.98 cMStart91,282,126 bp [2]
End91,304,329 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • monocyte

  • rectum

  • gallbladder

  • ventricular zone

  • islet of Langerhans

  • endothelial cell

  • Achilles tendon

  • blood

  • epithelium of colon

  • stromal cell of endometrium
  • genital tubercle

  • tail of embryo

  • granulocyte

  • Rostral migratory stream

  • vas deferens

  • aortic valve

  • stroma of bone marrow

  • cumulus cell

  • thymus

  • ventricular zone
More reference expression data
BioGPS
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3454

15975

Ensembl

ENSG00000142166

ENSMUSG00000022967

UniProt

P17181

P33896

RefSeq (mRNA)

NM_000629

NM_010508

RefSeq (protein)

NP_000620

NP_034638

Location (UCSC)Chr 21: 33.32 – 33.36 Mb Chr 16: 91.28 – 91.3 Mb
PubMed search[3] [4]
Wikidata

Interferon-alpha/beta receptor alpha chain is a protein that in humans is encoded by the IFNAR1 gene.[5] [6]

Function

[edit ]

The protein encoded by this gene is a type I membrane protein that forms one of the two chains of a receptor for type I interferons, including interferon-alpha, -beta, and -lambda. Binding and activation of the receptor stimulates Janus protein kinases, which in turn phosphorylate several proteins, including STAT1 and STAT2. The encoded protein also functions as an antiviral factor.[6]

Interactions

[edit ]

IFNAR1 has been shown to interact with:

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000142166Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000022967Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Novick D, Cohen B, Rubinstein M (Jun 1994). "The human interferon alpha/beta receptor: characterization and molecular cloning". Cell. 77 (3): 391–400. doi:10.1016/0092-8674(94)90154-6. PMID 8181059. S2CID 140206806.
  6. ^ a b "Entrez Gene: IFNAR1 interferon (alpha, beta and omega) receptor 1".
  7. ^ Abramovich C, Yakobson B, Chebath J, Revel M (Jan 1997). "A protein-arginine methyltransferase binds to the intracytoplasmic domain of the IFNAR1 chain in the type I interferon receptor". EMBO J. 16 (2): 260–6. doi:10.1093/emboj/16.2.260. PMC 1169633 . PMID 9029147.
  8. ^ Li X, Leung S, Kerr IM, Stark GR (Apr 1997). "Functional subdomains of STAT2 required for preassociation with the alpha interferon receptor and for signaling". Mol. Cell. Biol. 17 (4): 2048–56. doi:10.1128/mcb.17.4.2048. PMC 232052 . PMID 9121453.
  9. ^ Uddin S, Chamdin A, Platanias LC (Oct 1995). "Interaction of the transcriptional activator Stat-2 with the type I interferon receptor". J. Biol. Chem. 270 (42): 24627–30. doi:10.1074/jbc.270.42.24627 . PMID 7559568.
  10. ^ Yan H, Krishnan K, Greenlund AC, Gupta S, Lim JT, Schreiber RD, Schindler CW, Krolewski JJ (Mar 1996). "Phosphorylated interferon-alpha receptor 1 subunit (IFNaR1) acts as a docking site for the latent form of the 113 kDa STAT2 protein". EMBO J. 15 (5): 1064–74. doi:10.1002/j.1460-2075.1996.tb00444.x. PMC 450004 . PMID 8605876.
  11. ^ Richter MF, Duménil G, Uzé G, Fellous M, Pellegrini S (Sep 1998). "Specific contribution of Tyk2 JH regions to the binding and the expression of the interferon alpha/beta receptor component IFNAR1". J. Biol. Chem. 273 (38): 24723–9. doi:10.1074/jbc.273.38.24723 . PMID 9733772.
  12. ^ Kumar KG, Varghese B, Banerjee A, Baker DP, Constantinescu SN, Pellegrini S, Fuchs SY (Jul 2008). "Basal ubiquitin-independent internalization of interferon alpha receptor is prevented by Tyk2-mediated masking of a linear endocytic motif". J. Biol. Chem. 283 (27): 18566–72. doi:10.1074/jbc.M800991200 . PMC 2441555 . PMID 18474601.

Further reading

[edit ]
Chemokine receptor
(GPCRs)
CC
CXC
Other
TNF receptor
1-10
11-20
21-27
JAK-STAT
Type I
γ-chain
β-chain
gp130
IL12RB1
Other
Type II
Ig superfamily
IL 17 family
Enzyme-linked receptor


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