Jump to content
Wikipedia The Free Encyclopedia

Haloarcula

From Wikipedia, the free encyclopedia
Genus of archaea
Haloarcula
SEM image of Haloarcula quadrata .
Scientific classification
Domain:
Kingdom:
Phylum:
Class:
Order:
Family:
Genus:
Haloarcula

Torreblanca et al. 1986 emend. Ma et al. 2024[1]
Type species
Haloarcula vallismortis
(Gonzalez, Gutierrez & Ramirez 1979) Torreblanca et al. 1986
Species

See text

Haloarcula (common abbreviation Har.) is a genus of extreme halophilic Archaea in the class of Halobacteria.[2]

Cell Structure

[edit ]

Haloarcula species can be distinguished from other genera in the family Halobacteriaceae by the presence of specific derivatives of TGD-2 polar lipids. H. quadrata has predominantly flat, square-shaped, somewhat pleomorphic cells.[3]

Metabolism

[edit ]

H. quadrata was first isolated when researchers were attempting to culture Haloquadratum walsbyi , a haloarchaeon that was thought to be unculturable until 2004. Similar to other halophilic archaea, Haloarcula species grow optimally at 40–45 °C. Growth appears in sheets of up to 65 cells often in the shape of a square or triangle.

Taxonomy

[edit ]

The genus of Haloarcula was long grouped with other halophilic archaea such as Halobacterium until genomic analysis prompted to reorder this genus in the new family of Haloarculaceae.

Phylogeny

[edit ]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_10_2024[5] [6] [7] 53 marker proteins based GTDB 09-RS220[8] [9] [10]
Haloarcula

H. mannanilytica

H. terrestris Straková et al. 2023

H. sebkhae

H. tradensis Namwong et al. 2011

Haloarcula

H. salina (Zhang & Cui 2015) Ma et al. 2023

"H. rubripromontorii" Sanchez-Nieves et al. 2016

"H. taiwanensis" Chen et al. 2018

H. vallismortis (Gonzalez, Gutierrez & Ramirez 1979) Torreblanca et al. 1986

H. mannanilytica Enomoto et al. 2020

H. amylolytica Yang et al. 2007 ["H. aidinensis"]

H. hispanica Juez et al. 1986

H. japonica Takashina et al. 1991

H. marismortui Elazari-Volcani 1940 ex Oren et al. 1990
[H. quadrata, "H. californiae", "H. sinaiiensis"]

H. argentinensis Ihara et al. 1997 [H. tradensis]

H. sebkhae Barreteau et al. 2019

Unassigned Haloarcula

  • "H. ajinwuensis"
  • "H. algeriensis" Kharroub et al. 2005b
  • "H. altuensis"
  • "H. brevis" Ma et al. 2024
  • H. halobia Ma et al. 2024
  • H. halophila Ma et al. 2024
  • H. litorea Ma et al. 2024
  • "H. morrhuae" Torreblanca et al. 1986
  • H. ordinaria Ma et al. 2024
  • H. pelagica Ma et al. 2024
  • H. rara Ma et al. 2024
  • "H. regularis" Ma et al. 2024
  • "H. sediminis" Ma et al. 2024
  • "H. siamensis" Namwong et al. 2007

Ecology

[edit ]

Haloarcula species are found in neutral saline environments such as salt lakes, marine salterns, and saline soils. Like other members of the family Halobacteriaceae, Haloarcula requires at least 1.5 M NaCl for growth, but grow optimally in 2.0 to 4.5 M NaCl.[1]

See also

[edit ]

References

[edit ]
  1. ^ a b c Sayers; et al. "Haloarcula". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023年10月10日.
  2. ^ Oren, Aharon (2014), Rosenberg, Eugene; DeLong, Edward F.; Lory, Stephen; Stackebrandt, Erko (eds.), "The Family Halobacteriaceae", The Prokaryotes: Other Major Lineages of Bacteria and The Archaea, Berlin, Heidelberg: Springer, pp. 41–121, Bibcode:2014prok.book...41O, doi:10.1007/978-3-642-38954-2_313, ISBN 978-3-642-38954-2 , retrieved 2021年11月17日
  3. ^ Oren, A.; Ventosa, A.; Gutierrez, M. C.; Kamekura, M. (1999). "Haloarcula quadrata sp. nov., a square, motile archaeon isolated from a brine pool in Sinai (Egypt)". International Journal of Systematic Bacteriology. 49 (3): 1149–1155. doi:10.1099/00207713-49-3-1149 . PMID 10425773.
  4. ^ J.P. Euzéby. "Haloarcula". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023年10月10日.
  5. ^ "The LTP" . Retrieved 10 December 2024.
  6. ^ "LTP_all tree in newick format" . Retrieved 10 December 2024.
  7. ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  8. ^ "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
  9. ^ "ar53_r220.sp_label". Genome Taxonomy Database . Retrieved 10 May 2024.
  10. ^ "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.

Further reading

[edit ]
[edit ]
Prokaryotes: Archaea classification
Euryarchaeota
(Methanobacteriati)
"Hadarchaeota"
  • "Hadarchaeia"
    • "Hadarchaeales"
  • "Persephonarchaeia"
"Hydrothermarchaeota"
  • "Hydrothermarchaeia"
    • "Hydrothermarchaeales"
Methanobacteriota
Halobacteriota
Thermoplasmatota
  • "Izemarchaea"
    • "Thermoprofundales"
  • "Poseidoniia"
    • "Poseidoniales"
  • Thermoplasmata
    • "Aciduliprofundales"
    • "Gimiplasmatales"
    • "Halarchaeoplasmatales"
    • "Lunaplasmatales"
    • "Lutacidiplasmatales"
    • Methanomassiliicoccales
    • "Proteinoplasmatales"
    • "Sysuiplasmatales"
    • Thermoplasmatales
    • "Yaplasmatales"
DPANN
(Nanobdellati)
Proteoarchaeota
TACK
(Thermoproteati)
Thermoproteota
  • JANJXX01
    • "Panguiarchaeales"
  • Korarchaeia
    • "Korarchaeales"
  • Bathyarchaeia
    • "Bathyarchaeales"
    • "Bifangarchaeales"
    • "Hecatellales"
    • "Houtuarculales"
    • "Wuzhiqiibiales"
    • "Xuanwuarculales"
    • "Zhuquarculales"
  • Nitrososphaeria
  • "Methanomethylicia"
    • "Culexarchaeles"
    • "Methanohydrogenicales"
    • "Methanomethylarchaeales"
    • "Methanomethylicales"
    • "Methanomethylovorales"
    • "Nezhaarchaeales"
  • "Sulfolobia"
  • Thermoproteia
Asgardarchaeota
(Promethearchaeati)
Promethearchaeota
Heimdallarchaeota
  • Heimdallarchaeia
    • "Gerdarchaeales"
    • "Heimdallarchaeales"
    • "Hodarchaeales"
    • "Kariarchaeales"
  • "Njordarchaeia"
  • "Sifarchaeia"
    • "Borrarchaeales"
    • "Sifarchaeales"
  • "Tyrarchaeia"
  • "Wukongarchaeia"


Stub icon

This archaea-related article is a stub. You can help Wikipedia by expanding it.

AltStyle によって変換されたページ (->オリジナル) /