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HIST1H4L

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
H4C13
Available structures
PDB Ortholog search: PDBe RCSB
List of PDB id codes

4H9O, 3WKJ, 3AYW, 3WA9, 5B0Z, 5AVB, 2CV5, 5AV5, 3AV2, 3WTP, 3AV1, 3AZK, 3X1V, 5AV8, 1F66, 4QUU, 3CFS, 4YYK, 4QUT, 3NQJ, 3A6N, 3W99, 5AVC, 2RS9, 3F9Z, 3QZT, 3QBY, 3W97, 4M38, 4YM6, 3CFV, 4HGA, 1EQZ, 2RJE, 3QZV, 1HQ3, 4H9P, 3AZL, 3AFA, 1TZY, 3UVY, 5CPK, 3JPX, 4U9W, 4N3W, 4YYJ, 4YYD, 4H9N, 4H9R, 3AZI, 4LD9, 3UVX, 3AZH, 5BNX, 4N4F, 1U35, 4YYG, 3O36, 2ARO, 5AV9, 4H9S, 3AZF, 3W98, 4GQB, 4H9Q, 5BNV, 3WAA, 3AZG, 3AZE, 2RNY, 1ZKK, 2QQS, 2LVM, 3X1T, 3AN2, 2KWO, 3QZS, 3F9W, 5FFW, 5CPJ, 3F9X, 3IJ1, 4YM5, 3AZJ, 4YY6, 3AZN, 2IG0, 4YYH, 4YYI, 5CPI, 3W96, 3R45, 2KWN, 3F9Y, 5AV6, 3AZM, 5BO0, 3X1S, 4QYD, 4KGC, 3UVW, 4YYN, 3X1U, 3UW9, 2F8N, 3NQU, 5B0Y, 4YYM, 5C3I, 4Z5T, 5B24, 5FA5, 4Z2M, 5E5A, 5FWE, 5B2I, 5B40, 5B2J, 5JA4, 5AY8, 4ZUX

Identifiers
Aliases H4C13 , H4.k, H4/k, H4FK, histone cluster 1, H4l, histone cluster 1 H4 family member l, HIST1H4L, H4 clustered histone 13, H4C5, H4C4, H4C9, H4C12, H4-16, H4C3, H4C11, H4C1, H4C14, H4C15, H4C8, H4C6, H4C2
External IDsOMIM: 602831; MGI: 4843992; HomoloGene: 136248; GeneCards: H4C13; OMA:H4C13 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr. Chromosome 6 (human) [1]
Band 6p22.1Start27,873,148 bp [1]
End27,873,534 bp [1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr. Chromosome 13 (mouse)[2]
Band 13|13 A3.1Start22,015,937 bp [2]
End22,016,366 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • bone marrow cells

  • epithelium of colon

  • Achilles tendon

  • mucosa of transverse colon

  • granulocyte

  • tonsil

  • corpus callosum

  • ventricular zone

  • ganglionic eminence

  • blood
  • spermatid

  • spermatocyte

  • embryo

  • uterus

  • granulocyte

  • bone marrow

  • embryo

  • blastocyst

  • Mesencephalon

  • morula
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8368

319161

Ensembl

ENSG00000275126

ENSMUSG00000069305

UniProt

P62805

P62806

RefSeq (mRNA)

NM_003546

NM_175657

RefSeq (protein)
NP_003537
NP_003486
NP_003535
NP_003539
NP_003531

NP_003536

NP_291074
NP_783587
NP_783588
NP_835499
NP_835500

NP_001182350
NP_835515
NP_783585
NP_783586
NP_835582
NP_835583
NP_783583
NP_694813

Location (UCSC)Chr 6: 27.87 – 27.87 Mb Chr 13: 22.02 – 22.02 Mb
PubMed search[3] [4]
Wikidata

Histone H4 is a protein that in humans is encoded by the HIST1H4L gene.[5] [6] [7] [8]

Function

[edit ]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the small histone gene cluster on chromosome 6p22-p21.3.[8]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000275126Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000069305Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Albig W, Meergans T, Doenecke D (Mar 1997). "Characterization of the H1.5 gene completes the set of human H1 subtype genes". Gene. 184 (2): 141–8. doi:10.1016/S0378-1119(96)00582-3. PMID 9031620.
  6. ^ Albig W, Doenecke D (Feb 1998). "The human histone gene cluster at the D6S105 locus". Hum Genet. 101 (3): 284–94. doi:10.1007/s004390050630. PMID 9439656. S2CID 38539096.
  7. ^ Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ (Oct 2002). "The human and mouse replication-dependent histone genes". Genomics. 80 (5): 487–98. doi:10.1016/S0888-7543(02)96850-3. PMID 12408966.
  8. ^ a b "Entrez Gene: HIST1H4L histone cluster 1, H4l".

Further reading

[edit ]
PDB gallery

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