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ELF1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ELF1
Identifiers
Aliases ELF1 , E74 like ETS transcription factor 1, EFTUD1, RIA1
External IDsOMIM: 189973; MGI: 107180; HomoloGene: 7303; GeneCards: ELF1; OMA:ELF1 - orthologs
Gene location (Human)
Chromosome 13 (human)
Chr. Chromosome 13 (human) [1]
Band 13q14.11Start40,931,924 bp [1]
End41,061,440 bp [1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr. Chromosome 14 (mouse)[2]
Band 14|14 D3Start79,718,634 bp [2]
End79,819,934 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • secondary oocyte

  • monocyte

  • lymph node

  • bone marrow cell

  • Achilles tendon

  • nipple

  • appendix

  • gallbladder

  • mucosa of pharynx

  • urethra
  • mesenteric lymph nodes

  • decidua

  • thymus

  • mucosa of urinary bladder

  • transitional epithelium of urinary bladder

  • blood

  • left colon

  • spleen

  • lumbar spinal ganglion

  • left lung lobe
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1997

13709

Ensembl

ENSG00000120690

ENSMUSG00000036461

UniProt

P32519

Q60775

RefSeq (mRNA)
NM_001145353
NM_172373
NM_001370329
NM_001370330
NM_001370331

NM_001370332

NM_001286411
NM_001286412
NM_007920

RefSeq (protein)
NP_001138825
NP_758961
NP_001357258
NP_001357259
NP_001357260

NP_001357261

NP_001273340
NP_001273341
NP_031946

Location (UCSC)Chr 13: 40.93 – 41.06 Mb Chr 14: 79.72 – 79.82 Mb
PubMed search[3] [4]
Wikidata

E74-like factor 1 (ets domain transcription factor) is a protein that in humans is encoded by the ELF1 gene.[5] It was named for its similarity to E74, an ecdysone-inducible transcription factor from Drosophila .[6]

Function

[edit ]

This gene encodes an E26 transformation-specific related transcription factor. The encoded protein is primarily expressed in lymphoid cells and can act as both an enhancer and a repressor to regulate transcription of various genes. Alternative splicing results in multiple transcript variants.[5]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000120690Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036461Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: E74-like factor 1 (ets domain transcription factor)".
  6. ^ Thompson CB, Wang CY, Ho IC, Bohjanen PR, Petryniak B, June CH, Miesfeldt S, Zhang L, Nabel GJ, Karpinski B (Mar 1992). "cis-acting sequences required for inducible interleukin-2 enhancer function bind a novel Ets-related protein, Elf-1". Molecular and Cellular Biology. 12 (3): 1043–53. doi:10.1128/mcb.12.3.1043. PMC 369536 . PMID 1545787.

Further reading

[edit ]

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix–loop–helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2 /EREBP -related factors
(0.6) Miscellaneous


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