HiContactsData

This is the development version of HiContactsData; for the stable release version, see HiContactsData.

HiContacts companion data package

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DOI: 10.18129/B9.bioc.HiContactsData

Bioconductor version: Development (3.23)

Provides a collection of Hi-C files (pairs, (m)cool and fastq). These datasets can be read into R and further investigated and visualized with the HiContacts package. Data includes yeast Hi-C data generated by the Koszul lab from the Pasteur Institute.

Author: Jacques Serizay [aut, cre]

Maintainer: Jacques Serizay <jacquesserizay at gmail.com>

Citation (from within R, enter citation("HiContactsData")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("HiContactsData")

For older versions of R, please refer to the appropriate Bioconductor release.