countsimQC

This is the development version of countsimQC; for the stable release version, see countsimQC.

Compare Characteristic Features of Count Data Sets

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DOI: 10.18129/B9.bioc.countsimQC

Bioconductor version: Development (3.23)

countsimQC provides functionality to create a comprehensive report comparing a broad range of characteristics across a collection of count matrices. One important use case is the comparison of one or more synthetic count matrices to a real count matrix, possibly the one underlying the simulations. However, any collection of count matrices can be compared.

Author: Charlotte Soneson [aut, cre] ORCID iD ORCID: 0000-0003-3833-2169

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("countsimQC")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("countsimQC")

For older versions of R, please refer to the appropriate Bioconductor release.