SpectraQL

This is the development version of SpectraQL; for the stable release version, see SpectraQL.

MassQL support for Spectra

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DOI: 10.18129/B9.bioc.SpectraQL

Bioconductor version: Development (3.23)

The Mass Spec Query Language (MassQL) is a domain-specific language enabling to express a query and retrieve mass spectrometry (MS) data in a more natural and understandable way for MS users. It is inspired by SQL and is by design programming language agnostic. The SpectraQL package adds support for the MassQL query language to R, in particular to MS data represented by Spectra objects. Users can thus apply MassQL expressions to analyze and retrieve specific data from Spectra objects.

Author: Johannes Rainer [aut, cre] ORCID iD ORCID: 0000-0002-6977-7147 , Andrea Vicini [aut], Sebastian Gibb [ctb] ORCID iD ORCID: 0000-0001-7406-4443

Maintainer: Johannes Rainer <Johannes.Rainer at eurac.edu>

Citation (from within R, enter citation("SpectraQL")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SpectraQL")

For older versions of R, please refer to the appropriate Bioconductor release.