Spectra

This is the development version of Spectra; for the stable release version, see Spectra.

Spectra Infrastructure for Mass Spectrometry Data

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DOI: 10.18129/B9.bioc.Spectra

Bioconductor version: Development (3.23)

The Spectra package defines an efficient infrastructure for storing and handling mass spectrometry spectra and functionality to subset, process, visualize and compare spectra data. It provides different implementations (backends) to store mass spectrometry data. These comprise backends tuned for fast data access and processing and backends for very large data sets ensuring a small memory footprint.

Author: RforMassSpectrometry Package Maintainer [cre], Laurent Gatto [aut] ORCID iD ORCID: 0000-0002-1520-2268 , Johannes Rainer [aut] ORCID iD ORCID: 0000-0002-6977-7147 , Sebastian Gibb [aut] ORCID iD ORCID: 0000-0001-7406-4443 , Philippine Louail [aut] ORCID iD ORCID: 0009-0007-5429-6846 , Jan Stanstrup [ctb] ORCID iD ORCID: 0000-0003-0541-7369 , Nir Shahaf [ctb], Mar Garcia-Aloy [ctb] ORCID iD ORCID: 0000-0002-1330-6610 , Guillaume Deflandre [ctb] ORCID iD ORCID: 0009-0008-1257-2416 , Ahlam Mentag [ctb] ORCID iD ORCID: 0009-0008-5438-7067

Maintainer: RforMassSpectrometry Package Maintainer <maintainer at rformassspectrometry.org>

Citation (from within R, enter citation("Spectra")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Spectra")

For older versions of R, please refer to the appropriate Bioconductor release.