EBcoexpress

This is the development version of EBcoexpress; for the stable release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis

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DOI: 10.18129/B9.bioc.EBcoexpress

Bioconductor version: Development (3.23)

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Citation (from within R, enter citation("EBcoexpress")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")

EBcoexpress Demo PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Bayesian, Software

Version 1.55.0

In Bioconductor since BioC 2.10 (R-2.15) (13.5 years)

License GPL (>= 2)

Depends EBarrays, mclust, minqa

Imports

System Requirements

URL

Suggests graph, igraph, colorspace

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me dcanr

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EBcoexpress_1.55.0.tar.gz

Windows Binary (x86_64) EBcoexpress_1.55.0.zip (64-bit only)

macOS Binary (x86_64) EBcoexpress_1.55.0.tgz

macOS Binary (arm64) EBcoexpress_1.55.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/EBcoexpress

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBcoexpress

Bioc Package Browser https://code.bioconductor.org/browse/EBcoexpress/

Package Short Url https://bioconductor.org/packages/EBcoexpress/

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