EBarrays

This is the development version of EBarrays; for the stable release version, see EBarrays.

Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification

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DOI: 10.18129/B9.bioc.EBarrays

Bioconductor version: Development (3.23)

EBarrays provides tools for the analysis of replicated/unreplicated microarray data.

Author: Ming Yuan, Michael Newton, Deepayan Sarkar and Christina Kendziorski

Maintainer: Ming Yuan <myuan at isye.gatech.edu>

Citation (from within R, enter citation("EBarrays")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("EBarrays")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBarrays")

Introduction to EBarrays PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Clustering, DifferentialExpression, Software

Version 2.75.0

In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20.5 years)

License GPL (>= 2)

Depends R (>= 1.8.0), Biobase, lattice, methods

Imports Biobase, cluster, graphics, grDevices, lattice, methods, stats

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me EBcoexpress, gaga, geNetClassifier

Imports Me

Suggests Me Category, dcanr

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EBarrays_2.75.0.tar.gz

Windows Binary (x86_64) EBarrays_2.75.0.zip (64-bit only)

macOS Binary (x86_64) EBarrays_2.75.0.tgz

macOS Binary (arm64) EBarrays_2.75.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/EBarrays

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBarrays

Bioc Package Browser https://code.bioconductor.org/browse/EBarrays/

Package Short Url https://bioconductor.org/packages/EBarrays/

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