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## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IVAS")

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IVAS

DOI: 10.18129/B9.bioc.IVAS

Identification of genetic Variants affecting Alternative Splicing

Bioconductor version: Release (3.5)

Identification of genetic variants affecting alternative splicing.

Author: Seonggyun Han, Sangsoo Kim

Maintainer: Seonggyun Han <hangost at ssu.ac.kr>

Citation (from within R, enter citation("IVAS")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IVAS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("IVAS")
PDF R Script IVAS : Identification of genetic Variants affecting Alternative Splicing
PDF Reference Manual
Text NEWS

Details

biocViews AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, RNASeq, Regression, SNP, Sequencing, Software, Transcription
Version 1.96.0
In Bioconductor since BioC 3.1 (R-3.2) (2.5 years)
License GPL-2
Depends R (> 3.0.0), GenomicFeatures, ggplot2, Biobase
Imports doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, ggfortify, grDevices, methods, Matrix, BiocParallel, utils, stats
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Depends On Me IMAS
Imports Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IVAS_1.96.0.tar.gz
Windows Binary IVAS_1.96.0.zip
Mac OS X 10.11 (El Capitan) IVAS_1.96.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/IVAS
Package Short Url http://bioconductor.org/packages/IVAS/
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