To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

In most cases, you don't need to download the package archive at all.

RCytoscape

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see RCytoscape.

Display and manipulate graphs in Cytoscape

Bioconductor version: 3.4

Interactvive viewing and exploration of graphs, connecting R to Cytoscape.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Citation (from within R, enter citation("RCytoscape")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCytoscape")
PDF R Script RCytoscape Overview
PDF Reference Manual
Text README
Text NEWS

Details

Version 1.24.1
In Bioconductor since BioC 2.7 (R-2.12) (6.5 years)
License GPL-2
Depends R (>= 2.14.0), graph(>= 1.31.0), XMLRPC (>= 0.2.4)
Imports methods, XMLRPC, BiocGenerics
LinkingTo
Suggests RUnit
SystemRequirements
Enhances
Depends On Me
Suggests Me GeneNetworkBuilder, mmnet

Package Archives

Follow Installation instructions to use this package in your R session.

Windows Binary
Mac OS X 10.9 (Mavericks)
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