To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCyjs")

In most cases, you don't need to download the package archive at all.

RCyjs

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see RCyjs.

Display and manipulate graphs in cytoscape.js

Bioconductor version: 3.4

Interactive viewing and exploration of graphs, connecting R to Cytoscape.js.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Citation (from within R, enter citation("RCyjs")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCyjs")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCyjs")
PDF R Script RCyjs
PDF Reference Manual
Text README
Text NEWS

Details

Version 1.6.0
In Bioconductor since BioC 3.1 (R-3.2) (2 years)
License GPL-2
Depends R (>= 3.2.0), BrowserViz(>= 1.1.7), graph(>= 1.44.0)
Imports methods, httpuv (>= 1.3.2), Rcpp (>= 0.11.5), jsonlite (>= 0.9.15), BiocGenerics, igraph
LinkingTo
Suggests RUnit, BiocStyle, RefNet
SystemRequirements
Enhances
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RCyjs_1.6.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks) RCyjs_1.6.0.tgz
Package Downloads Report Download Stats

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