cellity

This is the released version of cellity; for the devel version, see cellity.

Quality Control for Single-Cell RNA-seq Data

Bioconductor version: Release (3.22)

A support vector machine approach to identifying and filtering low quality cells from single-cell RNA-seq datasets.

Author: Tomislav Illicic, Davis McCarthy

Maintainer: Tomislav Ilicic <ti243 at cam.ac.uk>

Citation (from within R, enter citation("cellity")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("cellity")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cellity")

An introduction to the cellity package HTML R Script

Reference Manual PDF

NEWS Text

Version 1.38.0

In Bioconductor since BioC 3.3 (R-3.3) (9.5 years)

License GPL (>= 2)

Depends R (>= 3.3)

System Requirements

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Follow Installation instructions to use this package in your R session.

Source Package cellity_1.38.0.tar.gz

Windows Binary (x86_64) cellity_1.38.0.zip

macOS Binary (x86_64) cellity_1.38.0.tgz

macOS Binary (arm64) cellity_1.38.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/cellity

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cellity

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