GeDi
This is the released version of GeDi; for the devel version, see GeDi.
Defining and visualizing the distances between different genesets
Bioconductor version: Release (3.22)
The package provides different distances measurements to calculate the difference between genesets. Based on these scores the genesets are clustered and visualized as graph. This is all presented in an interactive Shiny application for easy usage.
Author: Annekathrin Nedwed [aut, cre] ORCID iD ORCID: 0000-0002-2475-4945 , Federico Marini [aut] ORCID iD ORCID: 0000-0003-3252-7758
Maintainer: Annekathrin Nedwed <anneludt at uni-mainz.de>
citation("GeDi")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeDi")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GeDi")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.