MIRit
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see MIRit.
Integrate microRNA and gene expression to decipher pathway complexity
Bioconductor version: 3.21
MIRit is an R package that provides several methods for investigating the relationships between miRNAs and genes in different biological conditions. In particular, MIRit allows to explore the functions of dysregulated miRNAs, and makes it possible to identify miRNA-gene regulatory axes that control biological pathways, thus enabling the users to unveil the complexity of miRNA biology. MIRit is an all-in-one framework that aims to help researchers in all the central aspects of an integrative miRNA-mRNA analyses, from differential expression analysis to network characterization.
Author: Jacopo Ronchi [aut, cre] ORCID iD ORCID: 0000-0001-5520-4631 , Maria Foti [fnd] ORCID iD ORCID: 0000-0002-4481-1900
Maintainer: Jacopo Ronchi <jacopo.ronchi at unimib.it>
citation("MIRit")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MIRit")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MIRit")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.