chihaya

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see chihaya.

Save Delayed Operations to a HDF5 File

Bioconductor version: 3.20

Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

Author: Aaron Lun [cre, aut]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("chihaya")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("chihaya")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chihaya")

User guide HTML R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews DataImport, DataRepresentation, Software

Version 1.6.0

In Bioconductor since BioC 3.17 (R-4.3) (2 years)

License GPL-3

Depends DelayedArray

Imports methods, Matrix, rhdf5, Rcpp, HDF5Array

System Requirements C++17, GNU make

URL https://github.com/ArtifactDB/chihaya-R

Bug Reports https://github.com/ArtifactDB/chihaya-R/issues

Suggests BiocGenerics, S4Vectors, BiocSingular, ResidualMatrix, BiocStyle, testthat, rmarkdown, knitr

Linking To Rcpp, Rhdf5lib

Enhances

Depends On Me

Imports Me

Suggests Me alabaster.matrix

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package chihaya_1.6.0.tar.gz

Windows Binary (x86_64) chihaya_1.6.0.zip

macOS Binary (x86_64) chihaya_1.6.0.tgz

macOS Binary (arm64) chihaya_1.6.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/chihaya

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/chihaya

Bioc Package Browser https://code.bioconductor.org/browse/chihaya/

Package Short Url https://bioconductor.org/packages/chihaya/

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