To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sbgr")

In most cases, you don't need to download the package archive at all.

sbgr

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see sbgr.

R Client for Seven Bridges Genomics API

Bioconductor version: 3.2

R client for Seven Bridges Genomics API.

Author: Nan Xiao <road2stat at gmail.com>, Tengfei Yin <tengfei.yin at sbgenomics.com>

Maintainer: Nan Xiao <road2stat at gmail.com>

Citation (from within R, enter citation("sbgr")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sbgr")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("sbgr")
HTML Easy API: A user-friendly cascading API
HTML Running the FASTQC Pipeline with sbgr
PDF Reference Manual
Text NEWS
Text LICENSE

Details

biocViews DataImport, Software, ThirdPartyClient
Version 1.0.0
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License MIT + file LICENSE
Depends methods, utils, stats
Imports httr, jsonlite, objectProperties
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL https://www.sbgenomics.com
BugReports https://github.com/road2stat/sbgr/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source sbgr_1.0.0.tar.gz
Windows Binary sbgr_1.0.0.zip
Mac OS X 10.6 (Snow Leopard) sbgr_1.0.0.tgz
Mac OS X 10.9 (Mavericks) sbgr_1.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/sbgr/tree/release-3.2
Package Short Url http://bioconductor.org/packages/sbgr/
Package Downloads Report Download Stats

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