To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRcomp")

In most cases, you don't need to download the package archive at all.

miRcomp

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see miRcomp.

Tools to assess and compare miRNA expression estimatation methods

Bioconductor version: 3.2

Based on a large miRNA dilution study, this package provides tools to read in the raw amplification data and use these data to assess the performance of methods that estimate expression from the amplification curves.

Author: Matthew N. McCall <mccallm at gmail.com>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("miRcomp")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRcomp")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("miRcomp")
HTML Assessment and comparison of miRNA expression estimation methods (miRcomp)
PDF Reference Manual
Text LICENSE

Details

biocViews Preprocessing, QualityControl, Software, qPCR
Version 1.0.0
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License GPL-3 | file LICENSE
Depends R (>= 3.2), Biobase(>= 2.22.0), miRcompData
Imports utils, methods
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source miRcomp_1.0.0.tar.gz
Windows Binary miRcomp_1.0.0.zip
Mac OS X 10.6 (Snow Leopard) miRcomp_1.0.0.tgz
Mac OS X 10.9 (Mavericks) miRcomp_1.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/miRcomp/tree/release-3.2
Package Short Url http://bioconductor.org/packages/miRcomp/
Package Downloads Report Download Stats

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