To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("metaX")

In most cases, you don't need to download the package archive at all.

metaX

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see metaX.

An R package for metabolomic data analysis

Bioconductor version: 3.2

The package provides a integrated pipeline for mass spectrometry-based metabolomic data analysis. It includes the stages peak detection, data preprocessing, normalization, missing value imputation, univariate statistical analysis, multivariate statistical analysis such as PCA and PLS-DA, metabolite identification, pathway analysis, power analysis, feature selection and modeling, data quality assessment.

Author: Bo Wen <wenbo at genomics.cn>

Maintainer: Bo Wen <wenbo at genomics.cn>

Citation (from within R, enter citation("metaX")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("metaX")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaX")
PDF metaX tutorial
PDF Reference Manual
Text NEWS

Details

Version 1.0.3
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License LGPL-2
Depends R (>= 3.2.0), VennDiagram, pROC, SSPA, methods
LinkingTo
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source metaX_1.0.3.tar.gz
Windows Binary metaX_1.0.3.zip
Mac OS X 10.6 (Snow Leopard) metaX_1.0.0.tgz
Package Downloads Report Download Stats

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