To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")

In most cases, you don't need to download the package archive at all.

geneplotter

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see geneplotter.

Graphics related functions for Bioconductor

Bioconductor version: 3.2

Functions for plotting genomic data

Author: R. Gentleman, Biocore

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("geneplotter")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("geneplotter")
PDF How to assemble a chromLocation object
PDF Visualization of Microarray Data
PDF Reference Manual
Text README
Text NEWS

Details

biocViews Software, Visualization
Version 1.48.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License Artistic-2.0
Depends R (>= 2.10), methods, Biobase, BiocGenerics, lattice, annotate
Imports AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats, utils
LinkingTo
Suggests Rgraphviz, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
SystemRequirements
Enhances
URL
Depends On Me HD2013SGI, Hiiragi2013, HMMcopy
Imports Me biocGraph, DESeq, DESeq2, DEXSeq, ENmix, EnrichmentBrowser, flowQ, IsoGeneGUI, MethylSeekR, RNAinteract, RNAither
Suggests Me AgiMicroRna, BiocCaseStudies, biocGraph, Category, chimera, GOstats
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source geneplotter_1.48.0.tar.gz
Windows Binary geneplotter_1.48.0.zip
Mac OS X 10.6 (Snow Leopard) geneplotter_1.48.0.tgz
Mac OS X 10.9 (Mavericks) geneplotter_1.48.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/geneplotter/tree/release-3.2
Package Short Url http://bioconductor.org/packages/geneplotter/
Package Downloads Report Download Stats

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