To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TPP")

In most cases, you don't need to download the package archive at all.

TPP

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see TPP.

Analyze thermal proteome profiling (TPP) experiments

Bioconductor version: 3.2

Analyze thermal proteome profiling (TPP) experiments with varying temperatures (TR) or compound concentrations (CCR).

Author: Dorothee Childs, Holger Franken, Mikhail Savitski and Wolfgang Huber

Maintainer: Dorothee Childs <dorothee.childs at embl.de>

Citation (from within R, enter citation("TPP")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TPP")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("TPP")
PDF TPP_introduction
PDF Reference Manual
Text NEWS

Details

biocViews MassSpectrometry, Proteomics, Software
Version 2.0.4
In Bioconductor since BioC 3.1 (R-3.2) (1 year)
License Artistic-2.0
Depends R (>= 3.2.0), Biobase, openxlsx (>= 2.4.0), ggplot2 (>= 2.0.0)
Imports VGAM, reshape2, nls2, foreach, grid, gridExtra, doParallel, parallel, RColorBrewer, RCurl, plyr, VennDiagram
LinkingTo
Suggests BiocStyle, knitr, testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TPP_2.0.4.tar.gz
Windows Binary TPP_2.0.4.zip
Mac OS X 10.6 (Snow Leopard) TPP_2.0.1.tgz
Mac OS X 10.9 (Mavericks) TPP_2.0.4.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/TPP/tree/release-3.2
Package Short Url http://bioconductor.org/packages/TPP/
Package Downloads Report Download Stats

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