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genbankr
This package is for version 3.16 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see genbankr.
Parsing GenBank files into semantically useful objects
Bioconductor version: 3.16
Reads Genbank files.
Author: Gabriel Becker [aut, cre], Michael Lawrence [aut]
Maintainer: Gabriel Becker <becker.gabriel at gene.com>
Citation (from within R, enter
citation("genbankr")):
Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("genbankr")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("genbankr")
Reference Manual
PDF
NEWS
Text
Details
Version
1.26.0
In Bioconductor since
BioC 3.3 (R-3.3) (8 years)
License
Artistic-2.0
Depends
methods
Imports
BiocGenerics, IRanges(>= 2.13.15), GenomicRanges(>= 1.31.10), GenomicFeatures(>= 1.31.5), Biostrings, VariantAnnotation, rtracklayer, S4Vectors(>= 0.17.28), GenomeInfoDb, Biobase
System Requirements
See More
Suggests
RUnit, rentrez, knitr, rmarkdown, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
PACVr
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Links To Me
Build Report
Build Report
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package
genbankr_1.26.0.tar.gz
Windows Binary
genbankr_1.26.0.zip
macOS Binary (x86_64)
genbankr_1.26.0.tgz
macOS Binary (arm64)
genbankr_1.26.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/genbankr
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/genbankr
Bioc Package Browser
https://code.bioconductor.org/browse/genbankr/
Package Short Url
https://bioconductor.org/packages/genbankr/
Package Downloads Report
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Old Source Packages for BioC 3.16
Source Archive