DNAcopy

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see DNAcopy.

DNA copy number data analysis

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("DNAcopy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DNAcopy")

Details

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Suggests

Linking To

Enhances

Depends On Me CGHcall, cghMCR, Clonality, CRImage, PureCN

Imports Me ADaCGH2, AneuFinder, ChAMP, cn.farms, CNAnorm, CNVrd2, contiBAIT, conumee, CopywriteR, GWASTools, maftools, MDTS, MEDIPS, MethCP, MinimumDistance, QDNAseq, rCGH, Repitools, SCOPE, snapCGH

Suggests Me beadarraySNP, cn.mops, CopyNumberPlots, fastseg, nullranges, sesame

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.