qpcrNorm

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see qpcrNorm.

Data-driven normalization strategies for high-throughput qPCR data.

Bioconductor version: 3.13

The package contains functions to perform normalization of high-throughput qPCR data. Basic functions for processing raw Ct data plus functions to generate diagnostic plots are also available.

Author: Jessica Mar

Maintainer: Jessica Mar <jess at jimmy.harvard.edu>

Citation (from within R, enter citation("qpcrNorm")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("qpcrNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("qpcrNorm")

qPCR Normalization Example PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews GeneExpression, Preprocessing, Software

Version 1.50.0

In Bioconductor since BioC 2.4 (R-2.9) (15 years)

License LGPL (>= 2)

Depends methods, Biobase, limma, affy

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me EasyqpcR

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package qpcrNorm_1.50.0.tar.gz

Windows Binary qpcrNorm_1.50.0.zip

macOS 10.13 (High Sierra) qpcrNorm_1.50.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/qpcrNorm

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/qpcrNorm

Bioc Package Browser https://code.bioconductor.org/browse/qpcrNorm/

Package Short Url https://bioconductor.org/packages/qpcrNorm/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.13 Source Archive