geuvPack

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see geuvPack.

summarized experiment with expression data from GEUVADIS

DOI: 10.18129/B9.bioc.geuvPack

Bioconductor version: 3.12

FPKM from GEUVADIS, annotated to gencode regions

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("geuvPack")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("geuvPack")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ArrayExpress, ExperimentData, Genome, MicroarrayData, SequencingData

Version 1.22.0

License Artistic-2.0

Depends R (>= 2.10), SummarizedExperiment

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me yriMulti

Imports Me

Suggests Me gQTLBase, gQTLstats, yriMulti

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geuvPack_1.22.0.tar.gz

Windows Binary

macOS 10.13 (High Sierra)

Source Repository git clone https://git.bioconductor.org/packages/geuvPack

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geuvPack

Package Short Url https://bioconductor.org/packages/geuvPack/

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