AGDEX

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see AGDEX.

Agreement of Differential Expression Analysis

Bioconductor version: 3.12

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Citation (from within R, enter citation("AGDEX")):

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")

AGDEX.pdf PDF R Script

Reference Manual PDF

Version 1.38.0

In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)

License GPL Version 2 or later

Depends R (>= 2.10), Biobase, GSEABase

Imports stats

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Follow Installation instructions to use this package in your R session.

Source Package AGDEX_1.38.0.tar.gz

Windows Binary AGDEX_1.38.0.zip

macOS 10.13 (High Sierra) AGDEX_1.38.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/AGDEX

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AGDEX

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Old Source Packages for BioC 3.12 Source Archive