flowViz

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see flowViz.

Visualization for flow cytometry

DOI: 10.18129/B9.bioc.flowViz

Bioconductor version: 3.10

Provides visualization tools for flow cytometry data.

Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("flowViz")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("flowViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowViz")

Visualizing Gates with Flow Cytometry Data HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization

Version 1.50.0

In Bioconductor since BioC 2.0 (R-2.5) (17 years)

License Artistic-2.0

Depends R (>= 2.7.0), flowCore(>= 1.41.9), lattice

Imports stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc

System Requirements

URL

Suggests colorspace, flowStats, knitr, testthat

Linking To

Enhances

Depends On Me flowFP, flowTrans, flowVS, QUALIFIER

Imports Me flowClust, flowDensity, flowFit, flowStats, flowTrans, flowWorkspace, openCyto, QUALIFIER

Suggests Me flowBeads, flowClean, flowCore, flowTime, ggcyto

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowViz_1.50.0.tar.gz

Windows Binary flowViz_1.50.0.zip

Mac OS X 10.11 (El Capitan) flowViz_1.50.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/flowViz

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowViz

Bioc Package Browser https://code.bioconductor.org/browse/flowViz/

Package Short Url https://bioconductor.org/packages/flowViz/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.10 Source Archive