Vega
This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Vega.
An R package for copy number data segmentation
Bioconductor version: 3.10
Vega (Variational Estimator for Genomic Aberrations) is an algorithm that adapts a very popular variational model (Mumford and Shah) used in image segmentation so that chromosomal aberrant regions can be efficiently detected.
Author: Sandro Morganella
Maintainer: Sandro Morganella <sandro at ebi.ac.uk>
citation("Vega")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Vega")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Vega")
Details
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Follow Installation instructions to use this package in your R session.