SNPchip

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SNPchip.

Visualizations for copy number alterations

Installation

To install this package, start R (version "3.6") and enter:

if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("SNPchip")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SNPchip")

Details

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Suggests crlmm(>= 1.17.14), RUnit

Linking To

Enhances doSNOW, VanillaICE(>= 1.21.24), RColorBrewer

Depends On Me mBPCR

Imports Me crlmm, phenoTest

Suggests Me MinimumDistance, oligoClasses, VanillaICE

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.