MmPalateMiRNA

This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MmPalateMiRNA.

Murine Palate miRNA Expression Analysis

DOI: 10.18129/B9.bioc.MmPalateMiRNA

Bioconductor version: 3.10

R package compendium for the analysis of murine palate miRNA two-color expression data.

Author: Guy Brock <guy.brock at louisville.edu>, Partha Mukhopadhyay <p0mukh01 at louisville.edu>, Vasyl Pihur <vasyl.pihur at louisville.edu>, Robert M. Greene <Dr.Bob.Greene at gmail.com>, and M. Michele Pisano <mmpisa01 at louisville.edu>

Maintainer: Guy Brock <guy.brock at louisville.edu>

Citation (from within R, enter citation("MmPalateMiRNA")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("MmPalateMiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MmPalateMiRNA")

Palate miRNA Analysis PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Clustering, DifferentialExpression, GO, Microarray, MultipleComparison, Pathways, Preprocessing, QualityControl, ReportWriting, SequenceMatching, Software, TwoChannel

Version 1.36.0

In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)

License GPL-3

Depends R (>= 2.13.0), methods, Biobase, xtable, limma, statmod, lattice, vsn

Imports limma, lattice, Biobase

System Requirements

URL

Suggests GOstats, graph, Category, org.Mm.eg.db, microRNA, targetscan.Mm.eg.db, RSQLite, DBI, AnnotationDbi, clValid, class, cluster, multtest, RColorBrewer, latticeExtra

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MmPalateMiRNA_1.36.0.tar.gz

Windows Binary MmPalateMiRNA_1.36.0.zip

Mac OS X 10.11 (El Capitan) MmPalateMiRNA_1.36.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/MmPalateMiRNA

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MmPalateMiRNA

Bioc Package Browser https://code.bioconductor.org/browse/MmPalateMiRNA/

Package Short Url https://bioconductor.org/packages/MmPalateMiRNA/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.10 Source Archive