ChIPComp

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see ChIPComp.

Quantitative comparison of multiple ChIP-seq datasets

Bioconductor version: 3.10

ChIPComp detects differentially bound sharp binding sites across multiple conditions considering matching control.

Author: Hao Wu, Li Chen, Zhaohui S.Qin, Chi Wang

Maintainer: Li Chen <li.chen at emory.edu>

Citation (from within R, enter citation("ChIPComp")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ChIPComp")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChIPComp")

ChIPComp PDF R Script

Reference Manual PDF

NEWS Text

Version 1.16.0

In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)

License GPL

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Follow Installation instructions to use this package in your R session.

Source Package ChIPComp_1.16.0.tar.gz

Windows Binary ChIPComp_1.16.0.zip

Mac OS X 10.11 (El Capitan) ChIPComp_1.16.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/ChIPComp

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChIPComp

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Old Source Packages for BioC 3.10 Source Archive