To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocStyle")

In most cases, you don't need to download the package archive at all.

BiocStyle

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see BiocStyle.

Standard styles for vignettes and other Bioconductor documents

Bioconductor version: 3.0

Provides standard formatting styles for Bioconductor PDF and HTML documents. Package vignettes illustrate use and functionality.

Author: Martin Morgan, Andrzej Oles, Wolfgang Huber

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocStyle")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocStyle")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("BiocStyle")
PDF R Script Bioconductor LaTeX Style
HTML R Script Bioconductor style for HTML documents
PDF Reference Manual
Text NEWS

Details

biocViews Software
Version 1.4.1
In Bioconductor since BioC 2.13 (R-3.0) (2.5 years)
License Artistic-2.0
Depends
Imports
LinkingTo
Suggests knitr (>= 1.7), rmarkdown, BiocGenerics, RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me Rqc
Suggests Me affycoretools, AnnotationDbi, AnnotationForge, arrayQualityMetrics, ASGSCA, BayesPeak, baySeq, beadarray, bioassayR, BiocParallel, BitSeq, blima, blimaTestingData, CAFE, ccrepe, CexoR, ChemmineDrugs, ChemmineOB, ChemmineR, ChIPQC, ClassifyR, cleaver, clipper, compcodeR, CoRegNet, COSMIC.67, cosmiq, CRISPRseek, curatedBladderData, curatedCRCData, curatedOvarianData, dagLogo, DEGreport, DESeq2, DEXSeq, DiffBind, easyRNASeq, EBImage, EDASeq, eiR, EnrichmentBrowser, flowcatchR, fmcsR, FourCSeq, gdsfmt, genefilter, GeneOverlap, GenomeInfoDb, GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicInteractions, GenomicRanges, GenomicTuples, ggbio, graphite, groHMM, GSAR, Gviz, HD2013SGI, Hiiragi2013, HiTC, illuminaio, imageHTS, M3D, MBASED, messina, MethylAid, MethylMix, missMethyl, motifStack, mQTL.NMR, MSnID, mygene, mzR, NarrowPeaks, netbiov, nondetects, npGSEA, omicade4, OncoSimulR, PAA, parathyroidSE, paxtoolsr, Pbase, plethy, Polyfit, proteoQC, PSEA, qpgraph, quantro, QuasR, rain, Rcade, RefNet, ReQON, RforProteomics, rfPred, RGSEA, rhdf5, riboSeqR, Rnits, rols, rpx, Rsamtools, RUVSeq, sangerseqR, sapFinder, segmentSeq, SeqArray, seqplots, SGSeq, shinyMethyl, ShortRead, SigCheck, SigFuge, simulatorZ, SNPRelate, SomaticCancerAlterations, specL, SSPA, STAN, STATegRa, sva, systemPipeR, TFBSTools, tigre, tracktables, trackViewer, TurboNorm, VariantAnnotation, VariantFiltering, zebrafishRNASeq
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BiocStyle_1.4.1.tar.gz
Windows Binary BiocStyle_1.4.1.zip
Mac OS X 10.6 (Snow Leopard) BiocStyle_1.4.1.tgz
Mac OS X 10.9 (Mavericks) BiocStyle_1.4.1.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/BiocStyle/tree/release-3.0
Package Short Url http://bioconductor.org/packages/BiocStyle/
Package Downloads Report Download Stats

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