XDE

XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression

Bioconductor version: 2.7

Multi-level model for cross-study detection of differential gene expression.

Author: R.B. Scharpf, G. Parmigiani, A.B. Nobel, and H. Tjelmeland

Maintainer: Robert Scharpf <rscharpf at jhsph.edu>

To install this package, start R and enter:

 source("http://bioconductor.org/biocLite.R")
 biocLite("XDE")

To cite this package in a publication, start R and enter:

 citation("XDE")

PDF R Script XDE Vignette

PDF xdeLIN.pdf

PDF R Script XdeParameterClass Vignette

PDF Reference Manual

Depends R (>= 2.9.0), Biobase(>= 2.5.5), methods, graphics

Imports Biobase, genefilter, graphics, grDevices, gtools, MergeMaid, methods, stats, utils

System Requirements

License LGPL-2

URL

Depends On Me

Imports Me

Suggests Me

Version 1.10.0

Since Bioconductor 2.2 (R-2.7)

Windows Binary XDE_1.10.0.zip (32- & 64-bit)

MacOS 10.5 (Leopard) binary XDE_1.10.0.tgz

Common Bioconductor workflows include:

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