GGtools

software and data for genetics of gene expression (c) 2006 VJ Carey

Bioconductor version: 2.7

dealing with hapmap SNP reports, GWAS, etc.

Author: Vince Carey <stvjc at channing.harvard.edu>

Maintainer: Vince Carey <stvjc at channing.harvard.edu>

To install this package, start R and enter:

 source("http://bioconductor.org/biocLite.R")
 biocLite("GGtools")

To cite this package in a publication, start R and enter:

 citation("GGtools")

PDF R Script GGtools Bioinfo Application note support

PDF R Script GGtools overview

PDF lab2010.pdf

PDF Reference Manual

Depends R (>= 2.7.0), methods, Biobase(>= 1.11.26), GGBase(>= 3.7.5), snpMatrix(>= 1.13.3), annotate, IRanges, rtracklayer, org.Hs.eg.db, GenomicRanges, ff

System Requirements

License Artistic-2.0

URL

Depends On Me ceu1kg, encoDnaseI

Imports Me

Suggests Me hmyriB36, ind1KG

Version 3.8.4

Since Bioconductor 1.9 (R-2.4)

Windows Binary GGtools_3.8.4.zip (32- & 64-bit)

MacOS 10.5 (Leopard) binary GGtools_3.8.4.tgz

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!