To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")

In most cases, you don't need to download the package archive at all.

MLInterfaces

This package is for version 2.11 of Bioconductor; for the stable, up-to-date release version, see MLInterfaces.

Uniform interfaces to R machine learning procedures for data in Bioconductor containers

Bioconductor version: 2.11

Uniform interfaces to machine learning code for data in Bioconductor containers

Author: Vince Carey <stvjc at channing.harvard.edu>, Robert Gentleman, Jess Mar, and contributions from Jason Vertrees <jv at cs.dartmouth.edu> and Laurent Gatto <lg390 at cam.ac.uk>

Maintainer: V. Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("MLInterfaces")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("MLInterfaces")
PDF R Script A machine learning tutorial: applications of the Bioconductor MLInterfaces package to expression and ChIP-Seq data
PDF R Script MLInterfaces Computer Cluster
PDF R Script MLInterfaces devel for schema-based MLearn
PDF R Script MLInterfaces Primer
PDF Reference Manual
Text NEWS

Details

biocViews Bioinformatics, Classification, Clustering, Software
Version 1.38.1
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License LGPL
Depends R (>= 2.9), Biobase, MASS, methods, genefilter, rpart, rda, annotate, cluster, sfsmisc
Imports mboost, gdata, pls
LinkingTo
Suggests class, e1071, ipred, randomForest, gpls, pamr, rpart, MASS, nnet, ALL, gbm, mlbench, hgu95av2.db, som, RColorBrewer, hu6800.db, lattice, caret (>= 5.07), golubEsets, ada, keggorthology, kernlab, gbm, mboost, sfsmisc, party
SystemRequirements
Enhances parallel
URL
Depends On Me a4Classif
Imports Me
Suggests Me BiocCaseStudies
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MLInterfaces_1.38.1.tar.gz
Windows Binary MLInterfaces_1.38.1.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/MLInterfaces/tree/release-2.11
Package Short Url http://bioconductor.org/packages/MLInterfaces/
Package Downloads Report Download Stats

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