To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("survcomp")

In most cases, you don't need to download the package archive at all.

survcomp

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see survcomp.

Performance Assessment and Comparison for Survival Analysis

Bioconductor version: 2.10

R package providing functions to assess and to compare the performance of risk prediction (survival) models.

Author: Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush

Maintainer: Benjamin Haibe-Kains <bhaibeka at jimmy.harvard.edu>, Markus Schroeder <mschroed at jimmy.harvard.edu>, Catharina Olsen <colsen at ulb.ac.be>

Citation (from within R, enter citation("survcomp")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("survcomp")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("survcomp")
PDF SurvComp: a package for performance assessment and comparison for survival analysis
PDF Reference Manual

Details

biocViews DifferentialExpression, GeneExpression, Software, Visualization
Version 1.6.0
In Bioconductor since BioC 2.8 (R-2.13) (5 years)
License Artistic-2.0
Depends R (>= 2.10), survival, prodlim
Imports ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta
LinkingTo
Suggests Hmisc, CPE, clinfun, survJamda, Biobase
SystemRequirements
Enhances
URL http://compbio.dfci.harvard.edu
Depends On Me genefu
Imports Me
Suggests Me breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source survcomp_1.6.0.tar.gz
Windows Binary survcomp_1.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/survcomp/tree/release-2.10
Package Short Url http://bioconductor.org/packages/survcomp/
Package Downloads Report Download Stats

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