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This page was generated on 2025年12月04日 15:41 -0500 (2025年12月04日).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2 Linux (Ubuntu 24.04.3 LTS) x86_64 4.5.2 (2025年10月31日) -- "[Not] Part in a Rumble" 4878
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 256/435 Hostname OS / Arch INSTALL BUILD CHECK
mosaicsExample 1.48.0 (landing page)
Dongjun Chung
Snapshot Date: 2025年12月04日 07:30 -0500 (Thu, 04 Dec 2025)
git_url: https://git.bioconductor.org/packages/mosaicsExample
git_branch: RELEASE_3_22
git_last_commit: a221875
git_last_commit_date: 2025年10月29日 09:32:03 -0500 (Wed, 29 Oct 2025)
nebbiolo2 Linux (Ubuntu 24.04.3 LTS) / x86_64 OK OK WARNINGS UNNEEDED, same version is already published


CHECK results for mosaicsExample on nebbiolo2

To the developers/maintainers of the mosaicsExample package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: mosaicsExample
Version: 1.48.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:mosaicsExample.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings mosaicsExample_1.48.0.tar.gz
StartedAt: 2025年12月04日 12:46:09 -0500 (2025年12月04日)
EndedAt: 2025年12月04日 12:46:27 -0500 (2025年12月04日)
EllapsedTime: 18.3 seconds
RetCode: 0
Status: WARNINGS
CheckDir: mosaicsExample.Rcheck
Warnings: 1

Command output

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### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:mosaicsExample.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings mosaicsExample_1.48.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.22-data-experiment/meat/mosaicsExample.Rcheck’
* using R version 4.5.2 (2025年10月31日)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
 gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
 GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘mosaicsExample/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘mosaicsExample’ version ‘1.48.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mosaicsExample’ can be installed ... OK
* checking installed package size ... INFO
 installed size is 109.0Mb
 sub-directories of 1Mb or more:
 data 1.3Mb
 extdata 107.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... WARNING
 Failed with error: 'there is no package called 'mosaics''
 Error loading dataset 'exampleBinData':
 Error in .requirePackage(package) : 
 unable to load required package 'mosaics'
 
 The dataset(s) may use package(s) not declared in Depends/Imports.
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING
See
 ‘/home/biocbuild/bbs-3.22-data-experiment/meat/mosaicsExample.Rcheck/00check.log’
for details.

Installation output

mosaicsExample.Rcheck/00install.out

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###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL mosaicsExample
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘mosaicsExample’ ...
** this is package ‘mosaicsExample’ version ‘1.48.0’
** using staged installation
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mosaicsExample)

Tests output


Example timings

mosaicsExample.Rcheck/mosaicsExample-Ex.timings

name user system elapsed
exampleBinData 0 0 0

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