This page was generated on 2017年04月15日 16:49:24 -0400 (2017年4月15日).
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD check --no-vignettes --timings AffymetrixDataTestFiles_0.12.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.4-data-experiment/meat/AffymetrixDataTestFiles.Rcheck’ * using R version 3.3.3 (2017年03月06日) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘AffymetrixDataTestFiles/DESCRIPTION’ ... OK * this is package ‘AffymetrixDataTestFiles’ version ‘0.12.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... NOTE Found the following non-portable file paths: AffymetrixDataTestFiles/inst/annotationData/chipTypes/HuGene-1_0-st-v1/HuGene-1_0-st-v1.r4,10_probesets.pgf AffymetrixDataTestFiles/inst/annotationData/chipTypes/Mapping10K_Xba131/3.ASCII/Mapping10K_Xba131.CDF Tarballs are only required to store paths of up to 100 bytes and cannot store those of more than 256 bytes, with restrictions including to 100 bytes for the final component. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. * checking for sufficient/correct file permissions ... OK * checking whether package ‘AffymetrixDataTestFiles’ can be installed ... OK * checking installed package size ... NOTE installed size is 147.5Mb sub-directories of 1Mb or more: annotationData 70.7Mb gcos11Data 49.4Mb gcos14Data 6.7Mb rawData 20.6Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.4-data-experiment/meat/AffymetrixDataTestFiles.Rcheck/00check.log’ for details.
AffymetrixDataTestFiles.Rcheck/00install.out:
* installing *source* package ‘AffymetrixDataTestFiles’ ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (AffymetrixDataTestFiles)